Virus evolution
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1. Analyses for virus evolution
1.1. Phylogeny
1.2. Evolutionary rate
1.3. Divergence time
1.4. Natural selection
The natural selection operating at the amino acid sequence level can be detected by comparing the rates of synonymous and nonsynonymous substitutions.
1.5. Recombination
2. Influenza A virus
3. Hepatitis C virus
4. Human immunodeficiency virus type 1